microRNA name: let-7 WormBase ID: WBGene00002285 WormBase description of let-7: Enables mRNA 3'-UTR binding activity. Is involved in several processes, including negative regulation of Ras protein signal transduction; negative regulation of gene expression; and regulation of development, heterochronic. Part of RISC complex. Is expressed in several structures, including gonad; hypodermis; somatic nervous system; touch receptor neurons; and vulval precursor cell. Is used to study cancer. Conserved microRNA sequences of let-7: D.melanogaster: dme-let-7, dme-miR-963, dme-miR-977, dme-miR-984 H.sapiens: hsa-let-7a, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f, hsa-let-7g, hsa-let-7i, hsa-miR-196a, hsa-miR-196b, hsa-miR-98 Location: Intergenic |
Promoter length (bp): 1990 Promoter sequence: TTATCTTTTAATGTCTTCACaatttatagttatctcgttaattaagatgtttttttgccgatgcgggcacactttctatacatttttggaagctacaaaaaagttgagatattagctaaaaaatgaacgtttctttcaaatcataacttttttttgagaacagaacgtcttattttgaaatttggtagttttggaccatttgagttaaaaaagcaaagcccgaatttcggtaccctccctcttttaagcctgtaaaaatttagaggggggggggggaattttttgagatagttaaaccgttttttgaatgttaatttcatgaattttagaagcgtgaacctaaaaaaataccgcataattcattatttttgttaaaccatatgcctaataaattttatgtttttattttggcaacagcagcccatttgttaagtgaccccatatgcagcatcgatacagtttttttttaattggtggtcacttttttccgtctcaaaaaaaaactaggttatctttttttcacttttcaatctgtcctttcgaagatgttttgatatcgctttcgtaaaagatatgcagtttttttcctgaaaaatagaatagctggacaaactttaacttaacttacatgcccatttcaaatgtttctttcaaatttcccttcttcctttaccctcgaatgcacatgttgcaaaatccaggtcaccgcaataaaataccatcaaaagtggaacaaaagttccatttcttttttatccgattcgaaagagagagagagaaaaaaaaaacatctacgcgaatttaatcgggtgtcacgcagtgctagccgttgcacaggtcattgtttgcacggaaccaacttgcactgtttttttgtgggcggagttgaaagcgaaaaaaaactatctaggagggaactgggtcactcggatgtccacagtctgtccactttcaattcctcttcattcgtgcagccgttttttgctgtgacgtagtagtgggtatatctttctcgtgaaataacatgttgtgttcttcgagtgaatatattctttgaggcttttttaaggcagattttgaaacaatatagcaaaatttattgctctataatgaaactaaaaaattacaacttttaactacaaaaacatgcaaaaaaatggtataatttgaggtttacctaattttaattttgatttttcaaacatttaaacatccataaaaaaaatacaaaatcattttttggcatcatttctcctattttaaataattttattttaaaaattagcttctcaacattggaaaaaatgatcgaacatgcaacttttctagctataattgaaaatctgtcattgagcaattaatatagacccattttttcaacacccatacctttcttatcagtttccctcttgccatctttcgtgtacatttgcaacattttctggatcatcaatcaagtgtgcactgaccactctctctctcctcctatttccctccttctaaattcgtctaggcgtcgtttgcgtatgtgtatgtagcggcaggcactgccccgtttcacgcacttttgcctgataccatggaggacgacggcgcccggtactgccgcccgggcccgcggttcgcaacaatggagcatacggagacgaagagacgcagcgaaccgcgagccaccaagttgctccgtgtgccgccggcgcccttttagccccacctctcgcgggtttctgttcatatatgagaagcgcatcagtttttttttcttattctagatgagtagcccacctagcagcggtcgtttttttctcttttcgtaggaaaattttcagttacacttatttattagaaacctagatttagagacttttagaataactttacttcctagaacacatctccctttgaatttatatgtctaatttaacaacaagtactaatccatttttcaggcaagcaggcgattggtgGACGGTCTACACTGTGGATCCGG Restriction site: AflII/MluI |
Tissue specificity (embryo): Hypodermis Tissue specificity (L1): Intestine, Coelomocyte |
Number of insertion lines: 4 All strain names: SYS1747, SYS1748, SYS1749, SYS1750 Representative strain name: SYS1749 |
600-cell stage and L1 stage |
Embryonic 3D expression pattern 4-cell 8-cell 15-cell 28-cell ~50-cell ~100-cell ~200-cell ~350-cell ~500-cell ~600-cell 600-cell bean-stage |
L1 3D expression pattern |
► Lineage expression pattern of all strains until 350-cell stage |