microRNA name: miR-790

WormBase ID: WBGene00045351

WormBase description of miR-790: Is affected by several genes including eat-2; prg-1; and alg-1 based on RNA-seq studies. Is affected by multi-walled carbon nanotube and nicotine based on RNA-seq studies.

Conserved microRNA sequences of miR-790:

D.melanogaster: dme-miR-263b

H.sapiens: hsa-miR-183, hsa-miR-200a, hsa-miR-514, hsa-miR-96

Location: Intergenic

Promoter length (bp): 3320

Promoter sequence: AAAGGCAGGCGTCAGTCAATAATTTGATTGGAACCAATTTGGAGTTAAATATGATATGGGAGAAGAGCAACTCTGAGTCGCAAGGATACTGTACAAAAAGATCGAAAATTTGAAAATAACGAGAATATGAGTGGCAGCTCCATGACAGGAAGACTTTAAAAGCTACGAGCATGGAACTTGGATGTTTCACAAAGTTTACTATTTCAGTTACATCATAAATGTTTCAGTTACATCATAAATCATTGTTGAAAAAATGTACTGTCAGAGATATTTCGCAGATCTTCTCGAACCTTCCAATATATTCCACAACCATTTTATATTTCACTTCAACAACCCTCAACACTCTGTGCCTCCATCTTGTTGTCTTCGAGGACATCGTCGGGGCGCCTCAAGATTGTTCCGATCTTCTTCGTTGCGAAAGACTTGAAGAGAAAAAGAGAGAGAGAAAGAGAGACTGGTAATTTTCGCATTAGCAATCGAATCGAACCGACTCTTCTCCTTTCTGTGGAGACAAAGGGACATTTGAGAGTCTGCCTGTGTGTTGAGGTTCGAGTCAAATAATAGACATTTATCTTTTGATTCAAAATACGATACCTCCAGGTGTTGTTAAAGATTCCATTGTGATTTTGCGAAAAATATTTTGTAGAAGTGATATTGGGGAGAGAGAGACCACTTATAAGATCCCCTTTTTCGTACCATCTGTGCCAAGTTTTCTGTATTAATTTATATAGAACTATAGAGAAATATTTGTACTTTCTAAAAACATTTCTTGTTTTGATGAAAAGTTTTGAGAAGCTGCTCAAAAACTGTATCAAATATGAATATGCCGATCACCACATTCACTCAGCTCATAGCGACTTTGAGACGGGGTTTGAGCAACTTTTTAAAACAATTATTAAACGTAAAATAATTTTCAGAAAGCAAATACATGTATTACTCAATATTTTTATAAAACAGAGAAATTTACAAAAAATCTGCTCATGTTTCAGGTTCAGCATTTGTGAAAATACCTTGGCTTTAAATTACTAACATGTTCAGTAAAAGGTGTTTATCATATGTTGGACAGGCACAGCTTCACTCCAAAATTTTCCGTTTTACTTACCTTCCTACAAGCTTGCCTACTGCCTACCTTCCATACTGACCAATTTTGACGCGAACCCAACTTTTTGGTGATGGCACAGTTTTCTCCTTTCTCAGTTCTCATTTCGCTCAACTTGTTGAAAGTTCACATAATAAAGCGTATGTCGGGGTACTGTAGTAGTACTTTACAATTACTGTAGTTTCAGTAAGGCACAAGGTAGGCATAGGTCACCTTGAAATacctattctctaacaattgtatttcttcttcacactcttatttccctcaaagtgtcaccttttcctttcgtcaccgaatttcgaaaaatgcggccaagatcctatctctccattgcctttgagtggaacctgacgtgtcgcacacgtcttttgtacctttggaaccagtgaaatttttttgcatttccactatgtgcagaaatttgaaacaattttatgatttttagtaattttatgtacgttgtttagcagccaaattcaattaaattcaattgtaaaatcaggaacaaactatctttagaatagctatatgtctaatcagagcggcccaagaaggtatatgtacagtaataatattttgaaaatttaaaaaatcgactaaaatgtttttttgaatgaacttaaacggaaatttgtactgaaataaacttagaaagtttgttgtagtataaatgactaaatacttgaaacatttctgcactgcaaaaaatcacacttatgaagaggttccatctggatttgggttgattaagcatgatatatgtaaatttaaacaatttctcctgggagaaaactccgtctctcattgtaagtttttttggtttaacaaggattccgattattttctcgatggagcagtattgaatgagtttacaggatgaacagcctattttgcaccaatctgaaacagtattaatttttaaatctttcacagtaacatatatttctgcaagaatcctccttttcctttacaaatcaatgtcataaaaacatggaatcacaaatacacctgcataaataaccaaacatagcgcccacccgtaaccagtataaataggacagaatggagaaaaaggtgtttacatttcgaggcgtcgtcggcaaccgacaaatatcattgaatgtctctctgtgtgtctacgtgcgccgtaagagagaggaccgaccctcatcggcacggggcattccataccaaatacggaggagaatgagggaagaggtggaatcgaaatacatacaattttgagattggggatttgacaaaatcataactcagaattaggaaattgtatttaaagttcagtagattttcataagaattcaatatttaagtcagttttctgaaacaatagtttcaaaatgaattgaaaaaaattgcaaacaactaaaaactgttaataaaaacacaacactgaagtaagcgccctttacagaataaaattactatttttattaattgctgacaatgtcgacatagaagtgtggtttttgaatattcacattgaaatcatttctttgaaacagagaattaaaaaaaactgaacagctcaggaaaaataaaattaaaaacatattttaatcacaatttaaaaagtctttcaagtaaacatttttcagatctaaaacttttaaaggttattcagttttacgtttcttgtaatgtgggaaataaatcatgttggatagtgtttagattgagtggatgtttataaactagattatttgaaacaataaatttaaaattattaaaaattcaaacatttatttagaaagctttagaatcaatgatacaaacatgttacattgatataaaaacttcacatataattagaaaatgtcgcaagaaatattgttagaaacaaaacaatttttgggaaataaattaagaagataaaaatgaaatatctgttttttaatcaattctagcgctttaagtaaattttccattagccctactctgtgctgagattctgtatacatagttgcacgtttgttaaattttctaaataattattttttctgaaagttcggtaatcttaaaattttaccgtatttcattattaaaacttctttccaaacagacataccacttctttctgctttctgacaaatcttaaagattgtgtgaaacagagatatttctaaaaaaaaatttaatgcatgctcatgtttcatattgttcagtcgacttctctcccctcaaaaaaaaagtcccttca

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Tissue specificity (embryo):

Tissue specificity (L1): Glia, Seam cell, Rectum & anus

Number of insertion lines: 3

All strain names: SYS1757, SYS1758, SYS1759

Representative strain name: SYS1757

600-cell stage and L1 stage
The black dots on the lienage tree represent an increase in the fluorescence intensity of miRNAp::mNG::H2B during this cell cycle.

Embryo

L1

Embryonic 3D expression pattern

4-cell

8-cell

15-cell

28-cell

~50-cell

~100-cell

~200-cell

~350-cell

~500-cell

~600-cell

600-cell

bean-stage

L1 3D expression pattern

Left view

Right view

Dorsal view

Ventral view