microRNA name: miR-794 WormBase ID: WBGene00045328 WormBase description of miR-794: Is affected by several genes including prg-1; alg-1; and alg-2 based on RNA-seq studies. Is affected by nicotine based on quantitative PCR and RNA-seq studies. Conserved microRNA sequences of miR-794: D.melanogaster: dme-let-7, dme-miR-963, dme-miR-977, dme-miR-984 H.sapiens: hsa-let-7a, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f, hsa-let-7g, hsa-let-7i, hsa-miR-196a, hsa-miR-98 Location: Intergenic |
Promoter length (bp): 999 Promoter sequence: gaggggtttttcagtttttcagatactttgagcgggtagttttgacccattcgtgatgtcaattttataggctgtttgagcttgaattctacttgaaaaagaatgtcacaaaatccaagatgcctgaaaaaaccaaatggaaacacgtaaggcacaccgatggcaataaatttatctggatattcattttcaaatcgcgaaagtttaaaacttttttggggagtctaaaagatccatacaccaaagcacaaccttaccaagatcccactttcagccgctaaaagaaaaatatttttaatctacataattgcagtgcggaggtgcattttcaaaatcttgactttaacacatatcttttttgtgctctctggactcatttgtgcctgatagagacgccgatgagcaatcagtggcgggtgataagacaaaaagtcagaagacagacgacttctgtctcttgctactcgagcagttaaaaatctgcaacggtacttttccagatcaaactggaaaatcagccttgaattgtgttctagagaagccttgcaaagagtaaattgatcgaatttgatagggaacatccgtgaagatcactaaaacttctgagtttctggaattaattacagcgcacctactaaccagcaagttctccaaaccgagaattacgtcagcctttatgaaatttgagatgaatctgtgaatcttgttccaaaccgaaccaattttttgaaaatatataagtcctttcagttttccagaagtaaacttcagaaaatgtttttttcaaaaattgatccctaaagctcatttgatttctgactcctcatctcttctcctcatttcgtaaagttatcactagtcacataattgtagtacatatactctgcgtctcttcagagcagtggagcctgggagccaaggagcgaaggagcacagctcttttctcttatctttacttgcagctactaaactattctgcaaaaaaaaaCTGAGCGTGTC Restriction site: ApaI/SacII |
Tissue specificity (embryo): Tissue specificity (L1): Neuron |
Number of insertion lines: 10 All strain names: SYS1433, SYS1451, SYS1452, SYS1454, SYS1455, SYS1470, SYS1471, SYS1472, SYS1473, SYS1492 Representative strain name: SYS1473 |
600-cell stage and L1 stage |
Embryonic 3D expression pattern 4-cell 8-cell 15-cell 28-cell ~50-cell ~100-cell ~200-cell ~350-cell ~500-cell ~600-cell 600-cell bean-stage |
L1 3D expression pattern |
► Lineage expression pattern of all strains until 350-cell stage |