microRNA name: miR-79

WormBase ID: WBGene00003307

WormBase description of miR-79: Expressed in hypodermis.

Conserved microRNA sequences of miR-79:

D.melanogaster: dme-miR-281-1*, dme-miR-281-2*, dme-miR-4, dme-miR-7, dme-miR-79

H.sapiens: hsa-miR-320, hsa-miR-340, hsa-miR-548a-3p, hsa-miR-7, hsa-miR-9*

Location: Intergenic

Promoter length (bp): 2001

Promoter sequence: gattaattgacatgatatctattgacaggaaacaagatgattctatcactagtgaaacgattaagaacttgataatattgaatgtatctcaaaaggaaattatattgcttagagatcattgattctttagtagaagtgcacattgaaaatggcaatcactatcaggaaaactggagattggaatttagaaaaaatcttatacttttctgcaaaaaaaaaccgcgcgattaagaactcggagaaacaaaaaaaaacattttcgttgcttgctaattagcaaaattttccaagtttcaattttgtttcaaggacgtcgacaaatgtttatctttttttgtaatttttggttttgtcaacaaattgaaaaaaaatctgttgcaaaactttccaaaaattaaaaaataatgaaatatggactttgaaaaaacaaaagatatttttgtcgttatcatattctcatacctcttatctctctttctgtaatattctctcaatagattctgtctctattgacaaatgagctgctcggcgagcagcagtgagttggcttgttcttcgtgactccacttatcttttatcacttcaacaacacttctctctgtctgagaacagaaaaaattaatgaaaaatgtttttttctcaaatcgagttttcttaaagtttaaacggactaacaaaatgaatgtcagtattcaagtaacttcccactaataaaatgaaattcccaaacataatgcaaaaagtcagaatgttaatgagcatctattctgtgtctcttcattctttaattctctctatctatctcttcgtcccgcccgtcttctccgaaacaaaagcaaactgtgctccgatgcggcgcggagccctgtgtgtgtgcctgctcatttcaaaaatgagcacactcaaatgtcgtgacaaggcaccaattttccgtcttctcaaccacatttttcttagttttctatattatttgaagattctgataatcagcaataaaatcggttaagtttcaaaaaaatttgaaactttagttttgtgtatcaacaattgctcaaaattaaaataatcaccgtaaattctttaaaaaattttagaacaacaggattaaataaaacttccataaacgttaaaattcaaacaattacttgtaaatttaattctgatattcaattgtaaaacagttaccaaaaaaaagtacaaatttaaaaattaaaactttaaaggtacatatgttggaaacaatgtgacaacatgccaaaaagttattgttatttaaaaaaaaacataagaaatatctttgaatttttaggcttacaatttctaatagtcaaaagaatgtttttgaaaaaatgtgtggttgggaaattttatttttaatattttgaagttctcaatcagatcatttgacaaaattagactgcaggaatttgtctgaaataaattattaattttcaatattttattccctgtttataattttcgtggcaggacccaaaatcgtttttcagatgttttacttcattttgtcactgacttctcaaaacaaaatatactctatcaattcgaatgtataaagataattaatcaagtattgtgacctaattccctctaatatttccttccgtcttctttatcattccgttatcattcaaaggtattcaggtcaaatccacgtggagttatctcatcccgcgcatctccttcgatactatcttcttattcggggcgtccttgtacctatcttgagacacaatctgcgcatcgtaacggtcctgcaagtaggcggagcctcatcctcgtctcccctccccaacctatttgtcccgcccgtctccaaaacgccttcaattcgacattcaatgtgtatgtctgtgtcggttgtgctgcgctgtcggtgtgttcacatctacttttttggactgttatatatatactattaggttatattattttactactatattccaaactatattcatatggtaagttgaaatTAGTAGA


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Restriction site: ApaI/SacII

Tissue specificity (embryo): Hypodermis, Seam cell, P cell

Tissue specificity (L1): Hypodermis, Seam cell, P cell, Pharynx

Number of insertion lines: 7

All strain names: SYS1425, SYS1477, SYS1478, SYS1479, SYS1480, SYS1481, SYS1488

Representative strain name: SYS1488

600-cell stage and L1 stage
The black dots on the lienage tree represent an increase in the fluorescence intensity of miRNAp::mNG::H2B during this cell cycle.



Embryo
L1

Embryonic 3D expression pattern

4-cell

8-cell

15-cell

28-cell

~50-cell

~100-cell

~200-cell

~350-cell

~500-cell

~600-cell

600-cell

bean-stage

L1 3D expression pattern

Left view

Right view

Dorsal view

Ventral view

Lineage expression pattern of all strains until 350-cell stage