DPFF-1

WormBase ID: WBGene00016200

WormBase description: Is an ortholog of human DPF3 (double PHD fingers 3). Is predicted to have histone acetyltransferase activity and histone binding activity. Is expressed widely. Is used to study alcohol use disorder.

Reporter verification: Verified by PCR and sequencing
Primers used to verify fosmid reporter: 5'-CCCTCTGTAAAAGAAACCTGG-3'

Strain name: SYS113

Cross: OP579 x JIM113

Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; wgIs579 (dpff-1::TY1::EGFP::3xFLAG + unc-119(+))

Expression pattern: Transient-expression

Lineage expression pattern

350 stage

600 stage

3D expression pattern

4-cells

8-cells

15-cells

28-cells

~50-cells

~100-cells

~200-cells

~350-cells

~500-cells

~600-cells

600-cells

bean-stage

Inferred TF relationships

Based on expression similarity (strong, medium, weak): PQM-1, SKN-1, MDL-1, ELT-2, MED-2, NHR-232, ELT-7, END-1, T07F8.4, SEL-8


Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined)

Targeting: no-data

Targeted by: CEH-39, CEH-43, CEH-48, CND-1, HLH-1, LIN-13, MEP-1, PHA-4

Based on reannotated ChIP-seq (peaks are assigned to a target if it is located within 2 kb relative to the transcription start site; targets from L1 stage ChIP-seq data are underlined)

Targeting: no-data

Targeted by: CEH-39, CEH-43, CEH-48, CND-1, HLH-1, LIN-13, MEP-1, PHA-4