CEH-74

WormBase ID: WBGene00013876

WormBase description: Is predicted to have DNA binding activity. Is expressed in dorsal nerve cord and ventral nerve cord.

Reporter verification: Verified by PCR and sequencing
Primers used to verify fosmid reporter: 5'-AGCCCGCAGAATTTCTTCAA-3'

Strain name: SYS136

Cross: OP680 x JIM113

Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; wgIs680 (ceh-74::TY1::EGFP::3xFLAG + unc-119(+))

Expression pattern: Transient-expression

Lineage expression pattern

350 stage

600 stage

3D expression pattern

4-cells

8-cells

15-cells

28-cells

~50-cells

~100-cells

~200-cells

~350-cells

~500-cells

~600-cells

600-cells

bean-stage

Inferred TF relationships

Based on expression similarity (strong, medium, weak): ELT-2, ELT-7, LIN-22, MDL-1, PQM-1, RNT-1, NHR-12, NHR-232, GMEB-1, END-1, LIN-39, ELT-1, NHR-23, CEH-16, LIN-26, NOB-1, NHR-102, CEH-40, TBX-9, REF-1


Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined)

Targeting: no-data

Targeted by: PHA-4

Based on reannotated ChIP-seq (peaks are assigned to a target if it is located within 2 kb relative to the transcription start site; targets from L1 stage ChIP-seq data are underlined)

Targeting: no-data

Targeted by: MEP-1, NFYA-1, PHA-4, PROS-1, REF-2, UNC-55, EFL-1, SWSN-7, UNC-86