WormBase ID: WBGene00003692 WormBase description: Is predicted to have DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. |
Reporter verification: Verified by PCR and sequencing |
Strain name: SYS276 Cross: OP463 x JIM113 Strain genotype: ujIs113 (pie-1p::mCherry::H2B; nhr-2p::mCherry::his-24::let858 3'UTR; unc-119(+)) II; wgIs463 (nhr-102::TY1::EGFP::3xFLAG(92C12) + unc-119(+)) |
Expression pattern: Lineage-specific, Intestine-specific |
Lineage expression pattern 350 stage   |
600 stage  |
3D expression pattern  4-cells  8-cells  15-cells  28-cells  ~50-cells  ~100-cells  ~200-cells  ~350-cells  ~500-cells  ~600-cells  600-cells  bean-stage |
Inferred TF relationships Based on expression similarity (strong, medium, weak): MML-1, PQM-1, ELT-2, MDL-1, ELT-7, NHR-232, END-1, ELT-3, NHR-35, NHR-12, C16A3.4, END-3, DVE-1, ODD-2, NHR-23, LIN-39, TBX-9, LIN-26, CEH-20, PHA-4, HAM-2, PHP-3, HBL-1, ATF-7, NHR-25, HMBX-1, F23B12.7, CEH-74, SEL-8 Based on ChIP-seq (directly from ModERN database, targets from L1 stage ChIP-seq data are underlined) Targeting: no-data Targeted by: PQM-1, ELT-2, NHR-232, NHR-12, DVE-1, ODD-2, PHA-4, HAM-2, HMBX-1, AHR-1, ALY-1, BCL-11, BED-3, CEH-13, CEH-14, CEH-18, CEH-19, CEH-2, CEH-22, CEH-24, CEH-31, CEH-34, CEH-36, CEH-39, CEH-43, CEH-48, CEH-6, CEH-83, CEH-9, CHE-1, CND-1, COG-1, DMD-4, ELT-1, ELT-4, ETS-4, ETS-7, EYG-1, FAX-1, FKH-10, FKH-6, GMEB-2, HLH-1, HLH-15, HLH-30, HLH-8, HMG-4, HND-1, K09A11.1, LIM-6, LIN-11, LIN-13, LIN-32, LSY-2, M03D4.4, MEC-3, MED-1, MEP-1, MLS-2, NFYA-1, NHR-76, NPAX-4, PAG-3, PHA-2, POP-1, PROS-1, REF-2, RNT-1, SEM-2, SNAI-1, SOX-4, SPTF-1, SYD-9, TBX-2, TBX-7, TBX-8, TTX-3, UNC-120, UNC-3, UNC-39, UNC-42, UNC-62, UNC-86, ZIP-8, ZTF-11, MDL-1, ELT-3, C16A3.4, ALY-2, CEH-8, CEH-82, DPL-1, DSC-1, EFL-1, EGL-13, FKH-8, FOS-1, IRX-1, PAX-3, SKN-1, SWSN-7, UNC-130 |
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Targeting: no-data Targeted by: NA |
